Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913389.1_cds_XP_016463456.1_56579
CDS Infomation

[gene=LOC107786482] [db_xref=GeneID:107786482] [protein=transcription factor HBP-1b(c38)-like] [protein_id=XP_016463456.1] [location=complement(join(23746..23895,24314..24553,26175..26446,27165..27240,27357..27434,27557..27616,27774..27842,27991..28110,28627..28703,29296..29396,29484..29746))] [gbkey=CDS]
Sequence

ATGGGATTTCAAGGATCTTATTCAACAGAAGAAGAAAATAAGCTTTTTATTGGAGTTCAT
TTCATGGCTTCCTCTAACAAAAGTAATGACGACCTTTTACTAAATAATAATAGTCAAATT
TCTTTTGGAAGCAGCCAACAACAGTTTTTTCATAGTCCTCAGCAGCAACATGATCAGCAC
CAACTTCAAAATAATAGTAATCAGATTTCTTTTGGTCTGTTTCAGCAGCACTCATCTTCT
TCATCAAATCCTGGAAATTTCATAAACAAAGATAATAGTGGAGCTTATGATTTGGGAGAA
CTAGATCAAGCACTTTTTCTTTATCTTGATGGACAAGAGCCTTCTTCAATCCAAGATCAA
AGACATAATTCTGGGGTGAGGCCACCAACTCTCAACATTTTTCCATCACAACCAATGCAT
ATCGAGCCTTCCTCAACTAAGGCAAATAATGGATTAGTTTCTCAAGCAACAAGTGGTTCC
AACAAATCATCTCAGCCGTCCATGGCTAAAACTGATATTGTTCCTTCAGCTTCTGGACTG
GAACCACCCAAAACTGCTAAGCGTGAGGGAATTCGGAAGGGTCCAACTTCAAGTTCAGAG
CAAGATGCACCCAAAACACCAGACCCCAAGACATTAAGGAGACTTGCTCAGAATAGGGAG
GCAGCTAGGAAAAGCAGACTTAGGAAAAAGGCTTATGTTCAACAGCTAGAGTCAAGTAGA
ATAAGACTCGCTCAATTAGAGCAAGAAATACAAAGGGCCAGATCTCAAGGATTTTATGTT
GGGGGAAATGCTCTTCAAGCGGGAGAACAAGCCCTTGCAGTTAATATGGCCAATATCAGC
TCAGATGCTGCAATTTTTGACTTGGAGTACGCAAGATGGCTGGAGGAACACCATCGTCTA
ATGTGTGAGCTTAGGAATGCAGTACAGGAGCATTTGCAGGAGAACGAACTTCGTATCTAC
GTCGAAAATTGTATAACACATTATGACGAGATTATGAACCTCAAATGCATGCTTGCAAAG
TCTGATGTCTTTCATCTCGTTTCTGGTTTATGGAAGACTCCAGCTGAACGTTGTTTCTTG
TGGATGGGAGATTTCCGGCCATCCGAGCTTCTCAAAATTATACTTAGTCAGATTGAGCCA
TTAACAGAAAACCAACTAATGGGAATTTGTGGATTACAACAATCAACACAAGAAGCTGAG
GATGCTCTCTCACAAGGATTGGAATCTCTAAATCAGTCTCTCTCAGACACAATTGCCTCT
GATGCATTGGCTTGCCCACAGAATATGGCCAATTATATGGGCCAAATGGCTCTTGCCATG
AACAAACTCTCTACTGTTGAAGGCTTCCTTAGACAGGCTGACAATCTGAGGCACCAAACG
ATTCATAGGCTGCATCAAATCTTGACTACTCGTCAAGCCGCGAGGTGTTTTCTGGCAATC
GGCGAGTATTTTCATCGGCTTCGAGCTCTCAGCTCTCTCTGGCTGGCTCGCCCTCGACAG
GAATAG

Peptide Sequence

PEP ID

XP_016463456.1
PEP Infomation

PREDICTED: transcription factor HBP-1b(c38)-like [Nicotiana tabacum]
Sequence

MGFQGSYSTEEENKLFIGVHFMASSNKSNDDLLLNNNSQISFGSSQQQFFHSPQQQHDQH
QLQNNSNQISFGLFQQHSSSSSNPGNFINKDNSGAYDLGELDQALFLYLDGQEPSSIQDQ
RHNSGVRPPTLNIFPSQPMHIEPSSTKANNGLVSQATSGSNKSSQPSMAKTDIVPSASGL
EPPKTAKREGIRKGPTSSSEQDAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSR
IRLAQLEQEIQRARSQGFYVGGNALQAGEQALAVNMANISSDAAIFDLEYARWLEEHHRL
MCELRNAVQEHLQENELRIYVENCITHYDEIMNLKCMLAKSDVFHLVSGLWKTPAERCFL
WMGDFRPSELLKIILSQIEPLTENQLMGICGLQQSTQEAEDALSQGLESLNQSLSDTIAS
DALACPQNMANYMGQMALAMNKLSTVEGFLRQADNLRHQTIHRLHQILTTRQAARCFLAI
GEYFHRLRALSSLWLARPRQE

Transcript Sequence

Gene sequence data has not been registered.